Class: Subject of data (Subject)

This entity is the subject about which data or references are recorded. | This includes the idea of a human participant in a study, a cell line, an animal model, | or any other similar entity.

URI: anvil:Subject

classDiagram class Subject click Subject href "../Subject" AccessControlledRecord <|-- Subject click AccessControlledRecord href "../AccessControlledRecord" Subject : external_id Subject : has_access_policy Subject --> "0..1" AccessPolicy : has_access_policy click AccessPolicy href "../AccessPolicy" Subject : has_assertion Subject --> "*" SubjectAssertion : has_assertion click SubjectAssertion href "../SubjectAssertion" Subject : has_demographics Subject --> "0..1" Demographics : has_demographics click Demographics href "../Demographics" Subject : has_sample Subject --> "*" Sample : has_sample click Sample href "../Sample" Subject : id Subject : organism_type Subject : subject_type Subject --> "1" EnumSubjectType : subject_type click EnumSubjectType href "../EnumSubjectType"

Inheritance

Thing
- AccessControlledRecord
  - Subject

Slots

Name	Cardinality and Range	Description	Inheritance
subject_type	1 EnumSubjectType	Type of entity this record represents	direct
organism_type	0..1 String	Organism Type Label	direct
has_sample	* Sample	Which samples were collected or processed for this Subject?	direct
has_assertion	* SubjectAssertion	Which assertions are made about this Subject?	direct
has_demographics	0..1 Demographics	A demographic summary of the participant	direct
has_access_policy	0..1 AccessPolicy	Which access policy applies to this element?	AccessControlledRecord
id	1 String	ID associated with a class	Thing
external_id	* Uriorcurie	Other identifiers for this entity, eg, from the submitting study or in system...	Thing

Usages

used by	used in	type	used
FamilyRelationship	family_member	range	Subject
FamilyRelationship	other_family_member	range	Subject
FamilyMember	family_member	range	Subject
File	subject	range	Subject

Identifier and Mapping Information

Schema Source

from schema: https://anvilproject.org/acr-harmonized-data-model

Mappings

Mapping Type	Mapped Value
self	anvil:Subject
native	anvil:Subject

LinkML Source

Direct

name: Subject
description: This entity is the subject about which data or references are recorded.
  | This includes the idea of a human participant in a study, a cell line, an animal
  model, | or any other similar entity.
title: Subject of data
from_schema: https://anvilproject.org/acr-harmonized-data-model
is_a: AccessControlledRecord
slots:
- subject_type
- organism_type
- has_sample
- has_assertion
- has_demographics

Induced

name: Subject
description: This entity is the subject about which data or references are recorded.
  | This includes the idea of a human participant in a study, a cell line, an animal
  model, | or any other similar entity.
title: Subject of data
from_schema: https://anvilproject.org/acr-harmonized-data-model
is_a: AccessControlledRecord
attributes:
  subject_type:
    name: subject_type
    description: Type of entity this record represents
    title: Subject Type
    from_schema: https://anvilproject.org/acr-harmonized-data-model
    rank: 1000
    alias: subject_type
    owner: Subject
    domain_of:
    - Subject
    range: EnumSubjectType
    required: true
  organism_type:
    name: organism_type
    description: Organism Type Label
    title: Organism Type
    from_schema: https://anvilproject.org/acr-harmonized-data-model
    rank: 1000
    alias: organism_type
    owner: Subject
    domain_of:
    - Subject
    range: string
    required: false
  has_sample:
    name: has_sample
    description: Which samples were collected or processed for this Subject?
    title: Has sample
    from_schema: https://anvilproject.org/acr-harmonized-data-model
    rank: 1000
    alias: has_sample
    owner: Subject
    domain_of:
    - Subject
    range: Sample
    required: false
    multivalued: true
    inlined: true
  has_assertion:
    name: has_assertion
    description: Which assertions are made about this Subject?
    title: Has assertion
    from_schema: https://anvilproject.org/acr-harmonized-data-model
    rank: 1000
    alias: has_assertion
    owner: Subject
    domain_of:
    - Subject
    range: SubjectAssertion
    required: false
    multivalued: true
    inlined: true
  has_demographics:
    name: has_demographics
    description: A demographic summary of the participant.
    title: Has demographics
    from_schema: https://anvilproject.org/acr-harmonized-data-model
    rank: 1000
    alias: has_demographics
    owner: Subject
    domain_of:
    - Subject
    range: Demographics
    required: false
    multivalued: false
    inlined: true
  has_access_policy:
    name: has_access_policy
    description: Which access policy applies to this element?
    from_schema: https://anvilproject.org/acr-harmonized-data-model
    rank: 1000
    alias: has_access_policy
    owner: Subject
    domain_of:
    - AccessControlledRecord
    range: AccessPolicy
    inlined: false
  id:
    name: id
    description: ID associated with a class
    title: ID
    from_schema: https://anvilproject.org/acr-harmonized-data-model
    rank: 1000
    identifier: true
    alias: id
    owner: Subject
    domain_of:
    - Thing
    range: string
    required: true
    multivalued: false
  external_id:
    name: external_id
    description: Other identifiers for this entity, eg, from the submitting study
      or in systems link dbGaP
    title: External Identifiers
    from_schema: https://anvilproject.org/acr-harmonized-data-model
    rank: 1000
    alias: external_id
    owner: Subject
    domain_of:
    - Thing
    range: uriorcurie
    required: false
    multivalued: true